Tutorials#

These tutorials show case real-world examples of how to use the Latch SDK to develop bioinformatics workflows.

Each tutorial demonstrates a key concept within the Latch SDK.

Tutorial

Description

Key Concepts

SDK Feature

Bulk RNA-seq

Gene and transcript counts from bulk RNA-seq sample reads.

Running task in parallel over a list of inputs; Grouping files; Handling files and metadata

map_task, file_glob

Metamage

Taxonomic classification, assembly, binning and annotation of short-read host-associated metagenomics datasets

Reusing workflow in a larger workflow

subworkflows


Additional Resources#

You can also refer to Examples to see examples developed by the Latch team and our community members.